Li, Y. and Y. Zhang, 2012. Fisheries impact on the East China Sea Shelf ecosystem for 1969-2000. Helgoland Marine Research 66: 371-383.
Zhang, Y. and Y. Chen, 2007. Modeling and evaluating ecosystem in 1980s and 1990s for
American lobster (Homarus americanus) in the Gulf of Maine. Ecological Modeling 203: 475-489.
Zhang, Y., D. Brzezinski, J. Chang, K. Stepanek and Y. Chen, 2011. Spatial structuring of fish community in association with environmental variables in the Coastal Gulf of Maine. Journal of Northwest Atlantic Fishery Science 43: 47-64.
Zhang, Y., Y. Chen and Y. Chang, 2011. Estimating biological reference points using individual-based per-recruit models for the Gulf of Maine American lobster, Homarus americanus, fishery. Fisheries Research 108: 385-392.
Zhang, Y. and Y. Chen, 2012. The effectiveness of harvest control rules in managing the Gulf of Maine American lobster (Homarus americanus) fishery. North American Journal of Fisheries Management 32: 984-999.
Zhang, Y., Y. Li and Y. Chen, 2012. Modeling the dynamics of ecosystem for the American lobster in the Gulf of Maine. Aquatic Ecology 46: 451-464.
Yan, Y., Y. Zhang, G. Wu, X. He, C. Zhao and H. Lu, 2015. Seasonal feeding habits, reproduction, and distribution of Harpiosquilla harpax (Stomatopoda: Harpiosquillidae) in the Beibu Gulf, South China Sea. Journal of Crustacean Biology 35: 776-784.
Li, Y., Y. Zhang, N. E. Hussey and X. Dai, 2016. Urea and lipid extraction treatment effects on δ15N and δ13C values in pelagic sharks. Rapid Communications in Mass Spectrometry 30: 1-8.
Li, Y, N. Hussey, and Y. Zhang. 2016. Quantifying ontogenetic stable isotope variation between dermis and muscle tissue of two pelagic sharks. Aquatic Biology, 25: 53-60.
Li, Y., Y. Zhang, J. Xu, and S. Zhang. 2017. Spatial variations in food web structures with alternative stable states: evidence from stable isotope analysis in a large eutrophic lake. Chinese Journal of Oceanology and Limnology
Zhang, Y., Y. Chen, J. Zhu, S. Tian and X. Chen. 2017. Evaluating effectiveness of biological reference points for Bigeye tuna (Thunnus obesus) fishery and Yellowfin tuna (Thunnus albacares) fishery in the Indian Ocean. Aquaculture and Fisheries 2: 84-93.
Kilfoil, J. P.*, M. E. Bond, M. D. Campbell, J. J. Kiszka, K. R. Gastrich, M. R. Heithaus, Y. Zhang, and A. Wirsing. 2017. Do traditional video survey methods undercount sharks at high densities? A comparison using conventional and newly developed full-spherical camera technologies. Marine Ecology Progress Series 585: 113-121.
Zhang, Y., Y. Chen and C. Wilson, 2011. Developing and evaluating harvest control rules with different biological reference points for the American lobster fishery in the Gulf of Maine. ICES Journal of Marine Science 68: 1511-1524.
Zhang, Y. and S. X. Cadrin, 2013. Estimating effective sample size for length frequency distributions from Georges Bank groundfish samples: a comparative study. Transactions of the American Fisheries Society 142: 59-67.
Li, Y, Y. Zhang, and X. Dai. 2016. Trophic interactions among pelagic sharks and large predatory teleosts in the northeast central Pacific. Journal of Experimental Marine Biology and Ecology, 483: 97-103.
Xue, Z., Y. Zhang, M. Lin, S. Sun, W. Gao, and W. Wang. 2017. Effects of habitat fragmentation on the population genetic diversity of the Amur minnow (Phoxinus lagowskii). Mitochondrial DNA Part B: Resources 2: 331-336.
Chang, Y., C. Sun, Y. Chen, Y. Zhang and S. Yeh, 2011. Incorporating climate changes into population dynamic modeling: an individual-based modeling approach for lobster. Canadian Journal of Fisheries and Aquatic Sciences 68: 122-136.
Zhang, Y., Y. Chen, J. Zhu, S. Tian and X. Chen, 2013. Evaluating different harvest control rules for bigeye tuna (Thunnus obesus) and yellowfin tuna (Thunnus albacares) fisheries in the Indian Ocean. Fisheries Research 137: 1-8.
Li. Y., Y. Gong, Y. Zhang, and X. Chen. 2017. Inter-annual variability in trophic patterns of jumbo squid (Dosidicus gigas) off the Exclusive Economic Zone of Peru, implications for stable isotope values in gladius. Fisheries Research, 187: 22-30.
Yao, N.*, and Y. Zhang. 2018. Investigating temporal variation in stable carbon and nitrogen isotope values of Florida Caribbean spiny lobster Panulirus argus recruits. Bulletin of Marine Science 94: 847-861.
(*student coauthors highlighted)